Sevir.1G326200.1

Description : pumilio 23

Gene families : OG_01_0003787 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003787_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.1G326200.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.1G326200.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_167
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_8

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001313	Pumilio_RNA-bd_rpt	Pfam	553	571
IPR001313	Pumilio_RNA-bd_rpt	Pfam	413	444
IPR001313	Pumilio_RNA-bd_rpt	Pfam	590	624
IPR001313	Pumilio_RNA-bd_rpt	ProSiteProfiles	586	621
IPR016024	ARM-type_fold	SUPERFAMILY	306	662
IPR016024	ARM-type_fold	SUPERFAMILY	131	355
IPR001313	Pumilio_RNA-bd_rpt	ProSiteProfiles	406	442
IPR011989	ARM-like	Gene3D	520	669
IPR011989	ARM-like	Gene3D	93	475
IPR040000	NOP9	PANTHER	29	774
IPR001313	Pumilio_RNA-bd_rpt	SMART	184	219
IPR001313	Pumilio_RNA-bd_rpt	SMART	148	183
IPR001313	Pumilio_RNA-bd_rpt	SMART	549	585
IPR001313	Pumilio_RNA-bd_rpt	SMART	406	442
IPR001313	Pumilio_RNA-bd_rpt	SMART	586	621

No CAZYmes available for this sequence

External Links

No external refs found!