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  5. Sevir.9G353400.1

Sevir.9G353400.1


Description : Glucose-methanol-choline (GMC) oxidoreductase family protein


Gene families : OG_01_0001074 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001074_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G353400.1 No neighbors in network
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G353400.1
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_69


Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors ISM GOs from InterProScan
MF GO:0050660 flavin adenine dinucleotide binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000172 GMC_OxRdtase_N ProSitePatterns 119 142
IPR000172 GMC_OxRdtase_N Pfam 49 321
IPR000172 GMC_OxRdtase_N ProSitePatterns 280 294
IPR036188 FAD/NAD-bd_sf Gene3D 49 567
IPR007867 GMC_OxRtase_C Pfam 423 568
IPR036188 FAD/NAD-bd_sf SUPERFAMILY 47 577
IPR012132 GMC_OxRdtase PIRSF 25 581
HMM Family HMM Length Query Length e-Value Query Start Query End
AA3 618 582 2.8e-70 38 580
No external refs found!