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  5. Sevir.1G326600.1

Sevir.1G326600.1


Description : shikimate kinase 1


Gene families : OG_01_0003242 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003242_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.1G326600.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.1G326600.1 No neighbors in network
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_31


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000623 Shikimate_kinase/TSH1 Hamap 91 276
IPR023000 Shikimate_kinase_CS ProSitePatterns 148 173
IPR027417 P-loop_NTPase Gene3D 75 290
IPR000623 Shikimate_kinase/TSH1 CDD 94 254
IPR031322 Shikimate/glucono_kinase Pfam 100 253
IPR027417 P-loop_NTPase SUPERFAMILY 92 214

No CAZYmes available for this sequence

No external refs found!