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  5. Sevir.9G385200.1

Sevir.9G385200.1


Description : Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains


Gene families : OG_01_0002368 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002368_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G385200.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G385200.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_154
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_10


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036770 Ankyrin_rpt-contain_sf Gene3D 592 746
IPR000048 IQ_motif_EF-hand-BS ProSiteProfiles 846 875
IPR005559 CG-1_dom Pfam 22 135
IPR000048 IQ_motif_EF-hand-BS ProSiteProfiles 869 893
IPR014756 Ig_E-set SUPERFAMILY 444 530
IPR000048 IQ_motif_EF-hand-BS SMART 868 890
IPR000048 IQ_motif_EF-hand-BS SMART 845 867
IPR002110 Ankyrin_rpt SMART 715 744
IPR002110 Ankyrin_rpt SMART 676 705
IPR013783 Ig-like_fold Gene3D 437 534
IPR002110 Ankyrin_rpt ProSiteProfiles 676 708
IPR005559 CG-1_dom ProSiteProfiles 16 142
IPR002909 IPT_dom Pfam 444 522
IPR000048 IQ_motif_EF-hand-BS Pfam 847 866
IPR000048 IQ_motif_EF-hand-BS Pfam 871 890
IPR027417 P-loop_NTPase SUPERFAMILY 839 896
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 622 737
IPR005559 CG-1_dom SMART 19 137

No CAZYmes available for this sequence

No external refs found!