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  5. Sevir.9G419500.1

Sevir.9G419500.1


Description : ABC transporter of the mitochondrion 3


Gene families : OG_01_0004714 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004714_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G419500.1 No neighbors in network
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G419500.1
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_103


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
MF GO:0140359 ABC-type transporter activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036640 ABC1_TM_sf Gene3D 137 475
IPR003439 ABC_transporter-like_ATP-bd ProSiteProfiles 486 720
IPR011527 ABC1_TM_dom Pfam 151 439
IPR003439 ABC_transporter-like_ATP-bd Pfam 502 651
IPR011527 ABC1_TM_dom ProSiteProfiles 151 452
IPR039421 Type_1_exporter PANTHER 10 723
IPR027417 P-loop_NTPase Gene3D 478 733
IPR027417 P-loop_NTPase SUPERFAMILY 476 721
IPR003593 AAA+_ATPase SMART 511 697
IPR017871 ABC_transporter-like_CS ProSitePatterns 623 637
IPR036640 ABC1_TM_sf SUPERFAMILY 145 474

No CAZYmes available for this sequence

No external refs found!