1. Home
  2. Species
  3. Setaria viridis
  4. Sequence
  5. Sevir.9G436000.1

Sevir.9G436000.1


Description : transcription coactivators


Gene families : OG_01_0004442 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004442_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G436000.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G436000.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_83
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_45


Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011011 Znf_FYVE_PHD SUPERFAMILY 1428 1501
IPR001357 BRCT_dom Pfam 116 179
IPR036420 BRCT_dom_sf Gene3D 7 100
IPR036420 BRCT_dom_sf Gene3D 112 226
IPR013083 Znf_RING/FYVE/PHD Gene3D 1407 1500
IPR001357 BRCT_dom ProSiteProfiles 114 197
IPR036420 BRCT_dom_sf SUPERFAMILY 10 98
IPR036420 BRCT_dom_sf Gene3D 1188 1302
IPR001357 BRCT_dom ProSiteProfiles 11 101
IPR001965 Znf_PHD SMART 1445 1494
IPR044254 At4g02110-like PANTHER 7 1493
IPR001357 BRCT_dom SMART 13 91
IPR001357 BRCT_dom SMART 1303 1394
IPR001357 BRCT_dom SMART 1185 1265
IPR001357 BRCT_dom SMART 111 187
IPR036420 BRCT_dom_sf SUPERFAMILY 115 196
IPR001357 BRCT_dom ProSiteProfiles 1193 1275
IPR036420 BRCT_dom_sf Gene3D 1303 1406
IPR036420 BRCT_dom_sf SUPERFAMILY 1192 1275

No CAZYmes available for this sequence

No external refs found!