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  5. Sevir.9G439100.1

Sevir.9G439100.1


Description : transducin family protein / WD-40 repeat family protein


Gene families : OG_01_0005628 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005628_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G439100.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G439100.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_7
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_133


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001680 WD40_rpt ProSiteProfiles 14 44
IPR001680 WD40_rpt SMART 189 229
IPR001680 WD40_rpt SMART 237 276
IPR001680 WD40_rpt SMART 4 35
IPR001680 WD40_rpt SMART 107 146
IPR001680 WD40_rpt SMART 149 186
IPR001680 WD40_rpt Pfam 10 35
IPR001680 WD40_rpt Pfam 191 229
IPR011047 Quinoprotein_ADH-like_supfam SUPERFAMILY 14 281
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 11 309
IPR007148 SSU_processome_Utp12 Pfam 486 576
IPR001680 WD40_rpt ProSiteProfiles 196 238

No CAZYmes available for this sequence

No external refs found!