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  5. Sevir.9G443600.1

Sevir.9G443600.1


Description : Thiamine pyrophosphate dependent pyruvate decarboxylase family protein


Gene families : OG_01_0000639 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000639_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G443600.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G443600.1 No neighbors in network
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_265


Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding ISM GOs from InterProScan
MF GO:0003824 catalytic activity ISM GOs from InterProScan
MF GO:0016831 carboxy-lyase activity ISM GOs from InterProScan
MF GO:0030976 thiamine pyrophosphate binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR029061 THDP-binding SUPERFAMILY 411 605
IPR012000 Thiamin_PyroP_enz_cen_dom Pfam 246 355
IPR012001 Thiamin_PyroP_enz_TPP-bd_dom Pfam 50 219
IPR012110 PDC/IPDC-like PANTHER 1 610
IPR011766 TPP_enzyme_TPP-bd Pfam 456 581
IPR012110 PDC/IPDC-like PIRSF 45 605
IPR029035 DHS-like_NAD/FAD-binding_dom SUPERFAMILY 235 388
IPR029061 THDP-binding SUPERFAMILY 49 228

No CAZYmes available for this sequence

No external refs found!