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  5. Sevir.9G448800.1

Sevir.9G448800.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0007671 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007671_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G448800.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G448800.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_109
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_58


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 555 589
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 419 453
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 384 418
IPR002885 Pentatricopeptide_rpt Pfam 544 600
IPR002885 Pentatricopeptide_rpt Pfam 372 432
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 349 383
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 310 344
IPR002885 Pentatricopeptide_rpt Pfam 309 361
IPR002885 Pentatricopeptide_rpt TIGRFAM 558 590
IPR002885 Pentatricopeptide_rpt TIGRFAM 386 419
IPR002885 Pentatricopeptide_rpt TIGRFAM 351 384
IPR002885 Pentatricopeptide_rpt TIGRFAM 490 520
IPR002885 Pentatricopeptide_rpt TIGRFAM 313 342
IPR002885 Pentatricopeptide_rpt TIGRFAM 422 454
IPR011990 TPR-like_helical_dom_sf Gene3D 345 456
IPR011990 TPR-like_helical_dom_sf Gene3D 457 663
IPR011990 TPR-like_helical_dom_sf Gene3D 208 344

No CAZYmes available for this sequence

No external refs found!