Sevir.9G456100.1

Description : plant U-box 13

Gene families : OG_01_0007934 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007934_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G456100.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G456100.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_173
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_46

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007166	cell surface receptor signaling pathway	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	ISM	GOs from InterProScan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016755	aminoacyltransferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR045210	RING-Ubox_PUB	CDD	348	390
IPR011989	ARM-like	Gene3D	556	722
IPR003613	Ubox_domain	ProSiteProfiles	343	417
IPR016024	ARM-type_fold	SUPERFAMILY	437	715
IPR003613	Ubox_domain	Pfam	344	414
IPR000225	Armadillo	Pfam	470	508
IPR000225	Armadillo	Pfam	552	590
IPR036537	Adaptor_Cbl_N_dom_sf	Gene3D	101	214
IPR000225	Armadillo	ProSiteProfiles	480	522
IPR000225	Armadillo	ProSiteProfiles	603	645
IPR011989	ARM-like	Gene3D	433	555
IPR000225	Armadillo	SMART	633	673
IPR000225	Armadillo	SMART	551	591
IPR000225	Armadillo	SMART	677	717
IPR000225	Armadillo	SMART	592	632
IPR000225	Armadillo	SMART	428	467
IPR000225	Armadillo	SMART	510	550
IPR000225	Armadillo	SMART	469	509
IPR000225	Armadillo	ProSiteProfiles	562	604
IPR013083	Znf_RING/FYVE/PHD	Gene3D	341	417
IPR003613	Ubox_domain	SMART	347	410

No CAZYmes available for this sequence

External Links

No external refs found!

Sevir.9G456100.1

Expression Profile

Co-expression Networks

Functional Annotation