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  5. Sevir.9G475400.1

Sevir.9G475400.1


Description : Pathogenesis-related thaumatin superfamily protein


Gene families : OG_01_0000062 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000062_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G475400.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G475400.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_184
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_39


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001938 Thaumatin ProSiteProfiles 24 266
IPR001938 Thaumatin SMART 27 266
IPR001938 Thaumatin Pfam 31 266
IPR037176 Osmotin/thaumatin-like_sf SUPERFAMILY 25 267
IPR001938 Thaumatin PANTHER 1 285
IPR001938 Thaumatin PRINTS 74 85
IPR001938 Thaumatin PRINTS 127 143
IPR001938 Thaumatin PRINTS 26 38
IPR001938 Thaumatin PIRSF 1 301
IPR037176 Osmotin/thaumatin-like_sf Gene3D 25 266
IPR017949 Thaumatin_CS ProSitePatterns 88 104
HMM Family HMM Length Query Length e-Value Query Start Query End
GH152 216 327 5.5e-91 31 266
No external refs found!