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  5. Sevir.9G480100.1

Sevir.9G480100.1


Description : anaphase promoting complex 6


Gene families : OG_01_0010012 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010012_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G480100.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G480100.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_188
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_46


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001440 TPR_1 Pfam 497 522
IPR019734 TPR_repeat SMART 421 454
IPR019734 TPR_repeat SMART 494 527
IPR019734 TPR_repeat SMART 353 386
IPR019734 TPR_repeat SMART 455 488
IPR019734 TPR_repeat SMART 528 561
IPR019734 TPR_repeat SMART 174 207
IPR019734 TPR_repeat SMART 285 318
IPR019734 TPR_repeat SMART 387 420
IPR011716 TPR-3 Pfam 533 552
IPR011716 TPR-3 Pfam 462 481
IPR019734 TPR_repeat ProSiteProfiles 387 420
IPR019734 TPR_repeat ProSiteProfiles 353 386
IPR019734 TPR_repeat ProSiteProfiles 528 561
IPR019734 TPR_repeat Pfam 176 205
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 349 568
IPR011990 TPR-like_helical_dom_sf Gene3D 50 575
IPR019734 TPR_repeat ProSiteProfiles 494 527

No CAZYmes available for this sequence

No external refs found!