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  5. Sevir.1G340300.1

Sevir.1G340300.1


Description : lysm domain GPI-anchored protein 1 precursor


Gene families : OG_01_0004862 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004862_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.1G340300.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.1G340300.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_196
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_43


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036779 LysM_dom_sf Gene3D 184 228
IPR018392 LysM_dom SMART 185 228
IPR036779 LysM_dom_sf SUPERFAMILY 184 229
IPR018392 LysM_dom Pfam 186 228
IPR018392 LysM_dom Pfam 122 166
IPR018392 LysM_dom CDD 185 227
IPR018392 LysM_dom ProSiteProfiles 184 227
HMM Family HMM Length Query Length e-Value Query Start Query End
CBM50 40 428 3.1e-06 186 228
No external refs found!