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  5. Sevir.9G514300.1

Sevir.9G514300.1


Description : signal responsive 1


Gene families : OG_01_0004692 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004692_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G514300.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G514300.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_65
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_95


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036770 Ankyrin_rpt-contain_sf Gene3D 612 755
IPR005559 CG-1_dom Pfam 21 134
IPR027417 P-loop_NTPase SUPERFAMILY 851 903
IPR005559 CG-1_dom SMART 18 136
IPR002110 Ankyrin_rpt ProSiteProfiles 646 678
IPR014756 Ig_E-set SUPERFAMILY 446 531
IPR002909 IPT_dom Pfam 448 523
IPR000048 IQ_motif_EF-hand-BS SMART 875 897
IPR000048 IQ_motif_EF-hand-BS SMART 852 874
IPR005559 CG-1_dom ProSiteProfiles 15 141
IPR000048 IQ_motif_EF-hand-BS ProSiteProfiles 876 900
IPR002110 Ankyrin_rpt SMART 718 747
IPR002110 Ankyrin_rpt SMART 679 708
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 637 741
IPR013783 Ig-like_fold Gene3D 439 535
IPR002110 Ankyrin_rpt ProSiteProfiles 679 711
IPR000048 IQ_motif_EF-hand-BS Pfam 854 873
IPR000048 IQ_motif_EF-hand-BS Pfam 878 897
IPR000048 IQ_motif_EF-hand-BS ProSiteProfiles 853 882

No CAZYmes available for this sequence

No external refs found!