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  5. Sevir.9G535500.1

Sevir.9G535500.1


Description : histone H2A 11


Gene families : OG_01_0005476 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005476_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G535500.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G535500.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_188
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_29


Type GO Term Name Evidence Source
CC GO:0000786 nucleosome ISM GOs from InterProScan
MF GO:0003677 DNA binding ISM GOs from InterProScan
MF GO:0046982 protein heterodimerization activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR007125 Histone_H2A/H2B/H3 Pfam 13 107
IPR009072 Histone-fold SUPERFAMILY 21 115
IPR032458 Histone_H2A_CS ProSitePatterns 37 43
IPR002119 Histone_H2A PRINTS 74 87
IPR002119 Histone_H2A PRINTS 29 51
IPR002119 Histone_H2A PRINTS 88 102
IPR002119 Histone_H2A PRINTS 115 133
IPR002119 Histone_H2A PRINTS 59 74
IPR032454 Histone_H2A_C Pfam 108 137
IPR002119 Histone_H2A SMART 18 138
IPR002119 Histone_H2A CDD 30 134
IPR009072 Histone-fold Gene3D 17 138
IPR002119 Histone_H2A PANTHER 2 137

No CAZYmes available for this sequence

No external refs found!