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  5. Sevir.9G541300.1

Sevir.9G541300.1


Description : AMP-dependent synthetase and ligase family protein


Gene families : OG_01_0001522 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001522_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G541300.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G541300.1
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_51


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR045851 AMP-bd_C_sf Gene3D 452 555
IPR042099 ANL_N_sf Gene3D 15 451
IPR025110 AMP-bd_C Pfam 465 540
IPR020845 AMP-binding_CS ProSitePatterns 205 216
IPR000873 AMP-dep_Synth/Lig_com Pfam 41 456

No CAZYmes available for this sequence

No external refs found!