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  5. Sevir.9G543300.1

Sevir.9G543300.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0007800 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007800_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G543300.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G543300.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_118
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_148


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011990 TPR-like_helical_dom_sf Gene3D 66 274
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 240 349
IPR011990 TPR-like_helical_dom_sf Gene3D 275 406
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 158 266
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 361 508
IPR019734 TPR_repeat SMART 242 275
IPR019734 TPR_repeat SMART 158 191
IPR019734 TPR_repeat SMART 445 478
IPR019734 TPR_repeat SMART 487 520
IPR019734 TPR_repeat SMART 282 315
IPR019734 TPR_repeat SMART 403 436
IPR019734 TPR_repeat SMART 67 101
IPR019734 TPR_repeat SMART 200 233
IPR019734 TPR_repeat SMART 320 353
IPR011990 TPR-like_helical_dom_sf Gene3D 407 543

No CAZYmes available for this sequence

No external refs found!