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  5. Sevir.9G545800.1

Sevir.9G545800.1


Description : gamma tonoplast intrinsic protein


Gene families : OG_01_0000975 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000975_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G545800.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G545800.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_9
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_26


Type GO Term Name Evidence Source
MF GO:0015267 channel activity ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR023271 Aquaporin-like Gene3D 4 249
IPR000425 MIP PRINTS 101 120
IPR000425 MIP PRINTS 215 235
IPR000425 MIP PRINTS 145 163
IPR000425 MIP PRINTS 21 40
IPR000425 MIP PRINTS 64 88
IPR000425 MIP PRINTS 178 200
IPR022357 MIP_CS ProSitePatterns 82 90
IPR034294 Aquaporin_transptr PANTHER 1 249
IPR000425 MIP CDD 21 235
IPR000425 MIP Pfam 17 232
IPR023271 Aquaporin-like SUPERFAMILY 12 245

No CAZYmes available for this sequence

No external refs found!