Sevir.1G348100.1

Description : chaperonin 20

Gene families : OG_01_0004879 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004879_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.1G348100.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.1G348100.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_9
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_100

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
BP	GO:0006457	protein folding	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0043085	positive regulation of catalytic activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044093	positive regulation of molecular function	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	ISM	GOs from InterProScan
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0051341	regulation of oxidoreductase activity	None	Extended
BP	GO:0051353	positive regulation of oxidoreductase activity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901668	regulation of superoxide dismutase activity	None	Extended
BP	GO:1901671	positive regulation of superoxide dismutase activity	ISM	GOs from InterProScan

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR020818	Chaperonin_GroES	CDD	162	253
IPR018369	Chaprnonin_Cpn10_CS	ProSitePatterns	63	87
IPR020818	Chaperonin_GroES	Pfam	63	152
IPR020818	Chaperonin_GroES	Pfam	161	252
IPR020818	Chaperonin_GroES	PRINTS	218	230
IPR020818	Chaperonin_GroES	PRINTS	240	253
IPR020818	Chaperonin_GroES	PRINTS	161	176
IPR020818	Chaperonin_GroES	PRINTS	183	204
IPR011032	GroES-like_sf	SUPERFAMILY	160	253
IPR020818	Chaperonin_GroES	PANTHER	1	254
IPR017416	Cpn20	PIRSF	1	254
IPR037124	Chaperonin_GroES_sf	Gene3D	156	254
IPR037124	Chaperonin_GroES_sf	Gene3D	55	155
IPR011032	GroES-like_sf	SUPERFAMILY	61	154
IPR020818	Chaperonin_GroES	SMART	160	253
IPR020818	Chaperonin_GroES	SMART	62	153
IPR020818	Chaperonin_GroES	Hamap	160	254
IPR018369	Chaprnonin_Cpn10_CS	ProSitePatterns	161	185
IPR020818	Chaperonin_GroES	CDD	62	153
IPR020818	Chaperonin_GroES	Hamap	62	154

No CAZYmes available for this sequence

External Links

No external refs found!

Sevir.1G348100.1

Expression Profile

Co-expression Networks

Functional Annotation