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  5. Sevir.9G573700.3

Sevir.9G573700.3


Description : nucleic acid binding;zinc ion binding;DNA binding


Gene families : OG_01_0001786 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001786_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G573700.3
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G573700.3 No neighbors in network
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_92


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR004343 Plus-3_dom ProSiteProfiles 517 649
IPR003169 GYF ProSiteProfiles 810 862
IPR036128 Plus3-like_sf SUPERFAMILY 517 646
IPR004343 Plus-3_dom SMART 517 626
IPR019835 SWIB_domain SMART 376 462
IPR003121 SWIB_MDM2_domain ProSiteProfiles 376 459
IPR013083 Znf_RING/FYVE/PHD Gene3D 98 200
IPR003169 GYF SMART 811 864
IPR035445 GYF-like_dom_sf SUPERFAMILY 800 865
IPR004343 Plus-3_dom Pfam 522 625
IPR019786 Zinc_finger_PHD-type_CS ProSitePatterns 112 172
IPR003121 SWIB_MDM2_domain Pfam 384 457
IPR001965 Znf_PHD SMART 111 157
IPR035445 GYF-like_dom_sf Gene3D 812 866
IPR036885 SWIB_MDM2_dom_sf SUPERFAMILY 381 458
IPR011011 Znf_FYVE_PHD SUPERFAMILY 79 156
IPR036885 SWIB_MDM2_dom_sf Gene3D 377 466
IPR036128 Plus3-like_sf Gene3D 518 646
IPR003169 GYF Pfam 813 850

No CAZYmes available for this sequence

No external refs found!