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  5. Sevir.9G580900.1

Sevir.9G580900.1


Description : expansin B2


Gene families : OG_01_0000116 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000116_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G580900.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_24


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM GOs from InterProScan
BP GO:0019953 sexual reproduction ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR007117 Expansin_CBD Pfam 217 304
IPR036908 RlpA-like_sf SUPERFAMILY 85 214
IPR007118 Expan_Lol_pI PRINTS 108 126
IPR007118 Expan_Lol_pI PRINTS 88 103
IPR007118 Expan_Lol_pI PRINTS 262 276
IPR007118 Expan_Lol_pI PRINTS 130 148
IPR007118 Expan_Lol_pI PRINTS 198 214
IPR007118 Expan_Lol_pI PRINTS 301 315
IPR007112 Expansin/allergen_DPBB_dom SMART 126 205
IPR036908 RlpA-like_sf Gene3D 74 211
IPR005795 LolPI PRINTS 128 139
IPR005795 LolPI PRINTS 187 202
IPR005795 LolPI PRINTS 235 250
IPR005795 LolPI PRINTS 291 308
IPR005795 LolPI PRINTS 148 158
IPR005795 LolPI PRINTS 219 234
IPR005795 LolPI PRINTS 271 288
IPR005795 LolPI PRINTS 165 180
IPR036749 Expansin_CBD_sf Gene3D 212 319
IPR007117 Expansin_CBD ProSiteProfiles 228 315
IPR036749 Expansin_CBD_sf SUPERFAMILY 216 315
IPR009009 RlpA-like_DPBB Pfam 126 205
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 109 215

No CAZYmes available for this sequence

No external refs found!