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  5. Sevir.9G581000.1

Sevir.9G581000.1


Description : expansin B2


Gene families : OG_01_0000116 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000116_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G581000.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_452


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM GOs from InterProScan
BP GO:0019953 sexual reproduction ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036749 Expansin_CBD_sf Gene3D 165 267
IPR007118 Expan_Lol_pI PRINTS 250 264
IPR007118 Expan_Lol_pI PRINTS 149 165
IPR007118 Expan_Lol_pI PRINTS 57 75
IPR007118 Expan_Lol_pI PRINTS 79 97
IPR007118 Expan_Lol_pI PRINTS 37 52
IPR007118 Expan_Lol_pI PRINTS 211 225
IPR007117 Expansin_CBD Pfam 168 253
IPR036908 RlpA-like_sf Gene3D 17 162
IPR036749 Expansin_CBD_sf SUPERFAMILY 167 264
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 58 166
IPR007117 Expansin_CBD ProSiteProfiles 179 264
IPR005795 LolPI PRINTS 186 201
IPR005795 LolPI PRINTS 240 257
IPR005795 LolPI PRINTS 220 237
IPR005795 LolPI PRINTS 77 88
IPR005795 LolPI PRINTS 138 153
IPR005795 LolPI PRINTS 170 185
IPR005795 LolPI PRINTS 116 131
IPR009009 RlpA-like_DPBB Pfam 75 156
IPR036908 RlpA-like_sf SUPERFAMILY 33 165
IPR007112 Expansin/allergen_DPBB_dom SMART 75 156

No CAZYmes available for this sequence

No external refs found!