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  5. Sevir.1G354500.1

Sevir.1G354500.1


Description : XB3 ortholog 2 in Arabidopsis thaliana


Gene families : OG_01_0006393 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006393_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.1G354500.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.1G354500.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_131
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_26


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR017907 Znf_RING_CS ProSitePatterns 336 345
IPR002110 Ankyrin_rpt Pfam 223 278
IPR002110 Ankyrin_rpt ProSiteProfiles 117 138
IPR002110 Ankyrin_rpt Pfam 52 104
IPR001841 Znf_RING ProSiteProfiles 321 368
IPR002110 Ankyrin_rpt ProSiteProfiles 50 82
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 20 277
IPR036770 Ankyrin_rpt-contain_sf Gene3D 13 144
IPR036770 Ankyrin_rpt-contain_sf Gene3D 147 287
IPR002110 Ankyrin_rpt ProSiteProfiles 180 212
IPR002110 Ankyrin_rpt ProSiteProfiles 83 115
IPR001841 Znf_RING SMART 321 367
IPR002110 Ankyrin_rpt SMART 256 284
IPR002110 Ankyrin_rpt SMART 180 209
IPR002110 Ankyrin_rpt SMART 50 79
IPR002110 Ankyrin_rpt SMART 223 252
IPR002110 Ankyrin_rpt SMART 117 147
IPR002110 Ankyrin_rpt SMART 83 112
IPR002110 Ankyrin_rpt Pfam 181 208
IPR002110 Ankyrin_rpt ProSiteProfiles 223 255
IPR002110 Ankyrin_rpt PRINTS 181 196
IPR002110 Ankyrin_rpt PRINTS 239 253

No CAZYmes available for this sequence

No external refs found!