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  5. Sevir.1G355500.1

Sevir.1G355500.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0004114 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004114_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.1G355500.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.1G355500.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_58
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_102


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0006996 organelle organization ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR019734 TPR_repeat SMART 952 985
IPR019734 TPR_repeat SMART 994 1027
IPR019734 TPR_repeat SMART 910 943
IPR019734 TPR_repeat ProSiteProfiles 910 943
IPR025697 CLU_dom ProSiteProfiles 300 579
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 947 1065
IPR027523 CLU_prot PANTHER 1 1741
IPR028275 CLU_N Pfam 47 117
IPR033646 CLU-central CDD 698 840
IPR011990 TPR-like_helical_dom_sf Gene3D 862 1115
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 870 981
IPR033646 CLU-central Pfam 696 839

No CAZYmes available for this sequence

No external refs found!