Description : Peptidase S41 family protein
Gene families : OG_01_0009605 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009605_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.1G370800.1 | |
Neighborhood | Setaria viridis coexpression network - Anderson et al (2021): Sevir.1G370800.1 | |
Cluster | Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_116 | |
Cluster | Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_102 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
BP | GO:0006508 | proteolysis | ISM | GOs from InterProScan |
MF | GO:0008236 | serine-type peptidase activity | ISM | GOs from InterProScan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Source | Start | Stop |
---|---|---|---|---|
IPR041489 | PDZ_6 | Pfam | 249 | 302 |
IPR004447 | Peptidase_S41A | CDD | 336 | 501 |
IPR029045 | ClpP/crotonase-like_dom_sf | SUPERFAMILY | 146 | 505 |
IPR036034 | PDZ_sf | Gene3D | 228 | 319 |
IPR001478 | PDZ | SMART | 228 | 305 |
IPR005151 | Tail-specific_protease | SMART | 305 | 501 |
IPR004447 | Peptidase_S41A | TIGRFAM | 185 | 500 |
IPR001478 | PDZ | ProSiteProfiles | 216 | 290 |
IPR005151 | Tail-specific_protease | Pfam | 337 | 497 |
IPR036034 | PDZ_sf | SUPERFAMILY | 199 | 324 |
No CAZYmes available for this sequence
No external refs found! |