Sevir.1G376800.1

Description : Signal transduction histidine kinase, hybrid-type, ethylene sensor

Gene families : OG_01_0005142 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005142_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.1G376800.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.1G376800.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_3
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_97

Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	ISM	GOs from InterProScan
BP	GO:0000160	phosphorelay signal transduction system	ISM	GOs from InterProScan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	ISM	GOs from InterProScan
MF	GO:0004673	protein histidine kinase activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005789	endoplasmic reticulum membrane	ISM	GOs from InterProScan
BP	GO:0007165	signal transduction	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009723	response to ethylene	ISM	GOs from InterProScan
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
CC	GO:0016020	membrane	None	Extended
MF	GO:0016301	kinase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
MF	GO:0038023	signaling receptor activity	None	Extended
MF	GO:0038199	ethylene receptor activity	ISM	GOs from InterProScan
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0051740	ethylene binding	ISM	GOs from InterProScan
MF	GO:0060089	molecular transducer activity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140299	small molecule sensor activity	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036890	HATPase_C_sf	SUPERFAMILY	452	534
IPR003661	HisK_dim/P	Pfam	388	446
IPR003661	HisK_dim/P	SMART	386	451
IPR001789	Sig_transdc_resp-reg_receiver	SMART	651	764
IPR003018	GAF	Pfam	205	350
IPR011006	CheY-like_superfamily	SUPERFAMILY	649	769
IPR001789	Sig_transdc_resp-reg_receiver	ProSiteProfiles	652	768
IPR003018	GAF	SMART	205	360
IPR029016	GAF-like_dom_sf	Gene3D	193	361
IPR036890	HATPase_C_sf	Gene3D	453	625
IPR001789	Sig_transdc_resp-reg_receiver	Pfam	653	763
IPR014525	ETR	PIRSF	18	771
IPR003661	HisK_dim/P	CDD	384	446
IPR036097	HisK_dim/P_sf	SUPERFAMILY	371	450

No CAZYmes available for this sequence

External Links

No external refs found!

Sevir.1G376800.1

Expression Profile

Co-expression Networks

Functional Annotation