Sevir.1G387200.1

Description : Translation initiation factor 2, small GTP-binding protein

Gene families : OG_01_0005775 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005775_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.1G387200.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.1G387200.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_109
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_103

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003743	translation initiation factor activity	ISM	GOs from InterProScan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	ISM	GOs from InterProScan
BP	GO:0006413	translational initiation	ISM	GOs from InterProScan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036925	TIF_IF2_dom3_sf	SUPERFAMILY	750	865
IPR044145	IF2_II	CDD	626	719
IPR000795	T_Tr_GTP-bd_dom	ProSiteProfiles	446	619
IPR015760	TIF_IF2	PANTHER	29	964
IPR000178	TF_IF2_bacterial-like	TIGRFAM	367	957
IPR000178	TF_IF2_bacterial-like	ProSitePatterns	908	930
IPR023115	TIF_IF2_dom3	Pfam	751	847
IPR006847	IF2_N	Pfam	369	417
IPR009000	Transl_B-barrel_sf	SUPERFAMILY	623	705
IPR000178	TF_IF2_bacterial-like	Hamap	26	955
IPR027417	P-loop_NTPase	SUPERFAMILY	438	622
IPR027417	P-loop_NTPase	Gene3D	443	621
IPR009000	Transl_B-barrel_sf	SUPERFAMILY	860	955
IPR036925	TIF_IF2_dom3_sf	Gene3D	754	859
IPR000795	T_Tr_GTP-bd_dom	PRINTS	450	463
IPR000795	T_Tr_GTP-bd_dom	PRINTS	502	512
IPR000795	T_Tr_GTP-bd_dom	PRINTS	518	529
IPR000795	T_Tr_GTP-bd_dom	PRINTS	554	563
IPR005225	Small_GTP-bd_dom	TIGRFAM	450	609
IPR000795	T_Tr_GTP-bd_dom	Pfam	450	611

No CAZYmes available for this sequence

External Links

No external refs found!

Sevir.1G387200.1

Expression Profile

Co-expression Networks

Functional Annotation