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  5. Sevir.2G049000.1

Sevir.2G049000.1


Description : BTB-POZ and MATH domain 4


Gene families : OG_01_0004082 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004082_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.2G049000.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.2G049000.1 No neighbors in network
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_92


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0016567 protein ubiquitination ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000210 BTB/POZ_dom Pfam 222 348
IPR000210 BTB/POZ_dom SMART 231 350
IPR002083 MATH/TRAF_dom SMART 66 178
IPR011333 SKP1/BTB/POZ_sf SUPERFAMILY 209 348
IPR002083 MATH/TRAF_dom CDD 62 195
IPR045005 BPM1-6 PANTHER 37 422
IPR034090 BPM_C CDD 347 408
IPR008974 TRAF-like Gene3D 60 199
IPR002083 MATH/TRAF_dom ProSiteProfiles 61 195
IPR011333 SKP1/BTB/POZ_sf Gene3D 207 344
IPR000210 BTB/POZ_dom ProSiteProfiles 231 307

No CAZYmes available for this sequence

No external refs found!