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  5. Sevir.2G071600.2

Sevir.2G071600.2


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0015829 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015829_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.2G071600.2
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.2G071600.2
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_55
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_94


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 244 278
IPR002885 Pentatricopeptide_rpt Pfam 434 458
IPR002885 Pentatricopeptide_rpt Pfam 333 358
IPR002885 Pentatricopeptide_rpt Pfam 216 241
IPR002885 Pentatricopeptide_rpt Pfam 246 274
IPR011990 TPR-like_helical_dom_sf Gene3D 422 491
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 328 362
IPR002885 Pentatricopeptide_rpt Pfam 359 406
IPR032867 DYW_dom Pfam 535 660
IPR011990 TPR-like_helical_dom_sf Gene3D 138 320
IPR011990 TPR-like_helical_dom_sf Gene3D 321 421
IPR002885 Pentatricopeptide_rpt TIGRFAM 246 274
IPR002885 Pentatricopeptide_rpt TIGRFAM 362 396

No CAZYmes available for this sequence

No external refs found!