GRMZM5G898647_T01

Description : Cytochrome C assembly protein

Gene families : OG_01_0011845 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011845_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): GRMZM5G898647_T01
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: GRMZM5G898647_T01
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_350
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_19

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0006826	iron ion transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015232	heme transmembrane transporter activity	ISM	GOs from InterProScan
BP	GO:0015886	heme transport	ISM	GOs from InterProScan
CC	GO:0016020	membrane	ISM	GOs from InterProScan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0017004	cytochrome complex assembly	ISM	GOs from InterProScan
MF	GO:0020037	heme binding	ISM	GOs from InterProScan
BP	GO:0022607	cellular component assembly	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
MF	GO:0046906	tetrapyrrole binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901678	iron coordination entity transport	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR003557	Cyt_c_biogenesis_CcmC	NCBIfam	42	218
IPR003557	Cyt_c_biogenesis_CcmC	PRINTS	42	59
IPR003557	Cyt_c_biogenesis_CcmC	PRINTS	59	79
IPR003557	Cyt_c_biogenesis_CcmC	PRINTS	194	218
IPR003557	Cyt_c_biogenesis_CcmC	PRINTS	97	117
IPR003557	Cyt_c_biogenesis_CcmC	PRINTS	118	138
IPR003557	Cyt_c_biogenesis_CcmC	PRINTS	147	173
IPR045062	Cyt_c_biogenesis_CcsA/CcmC	PANTHER	12	209
IPR002541	Cyt_c_assembly	Pfam	5	173
IPR045062	Cyt_c_biogenesis_CcsA/CcmC	PANTHER	14	212
IPR003557	Cyt_c_biogenesis_CcmC	PRINTS	42	59
IPR003557	Cyt_c_biogenesis_CcmC	PRINTS	59	79
IPR003557	Cyt_c_biogenesis_CcmC	PRINTS	194	218
IPR003557	Cyt_c_biogenesis_CcmC	PRINTS	97	117
IPR003557	Cyt_c_biogenesis_CcmC	PRINTS	118	138
IPR003557	Cyt_c_biogenesis_CcmC	PRINTS	147	173
IPR002541	Cyt_c_assembly	Pfam	16	172
IPR003557	Cyt_c_biogenesis_CcmC	TIGRFAM	42	218

No CAZYmes available for this sequence

External Links

No external refs found!

GRMZM5G898647_T01

Expression Profile

Co-expression Networks

Functional Annotation