Zm00001d000260_T001

Description : photosystem II reaction center protein D

Gene families : OG_01_0022265 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0022265_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d000260_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d000260_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_158
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_165

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0009055	electron transfer activity	None	Extended
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009523	photosystem II	ISM	GOs from InterProScan
BP	GO:0009767	photosynthetic electron transport chain	None	Extended
BP	GO:0009772	photosynthetic electron transport in photosystem II	ISM	GOs from InterProScan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015979	photosynthesis	ISM	GOs from InterProScan
CC	GO:0016020	membrane	ISM	GOs from InterProScan
MF	GO:0016491	oxidoreductase activity	None	Extended
BP	GO:0019684	photosynthesis, light reaction	ISM	GOs from InterProScan
BP	GO:0022900	electron transport chain	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	ISM	GOs from InterProScan
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000484	Photo_RC_L/M	PANTHER	15	334
IPR000484	Photo_RC_L/M	ProSitePatterns	191	217
IPR036854	Photo_II_D1/D2_sf	Gene3D	142	305
IPR000484	Photo_RC_L/M	PRINTS	197	223
IPR000484	Photo_RC_L/M	PRINTS	142	164
IPR000484	Photo_RC_L/M	PRINTS	109	137
IPR005868	PSII_PsbD/D2	CDD	15	353
IPR000484	Photo_RC_L/M	Pfam	29	318
IPR005868	PSII_PsbD/D2	Hamap	1	353
IPR036854	Photo_II_D1/D2_sf	SUPERFAMILY	16	352
IPR005868	PSII_PsbD/D2	NCBIfam	1	353
IPR005868	PSII_PsbD/D2	TIGRFAM	1	353
IPR036854	Photo_II_D1/D2_sf	Gene3D	142	305
IPR005868	PSII_PsbD/D2	CDD	15	353
IPR005868	PSII_PsbD/D2	Hamap	1	353
IPR036854	Photo_II_D1/D2_sf	SUPERFAMILY	16	352
IPR000484	Photo_RC_L/M	PANTHER	15	353
IPR000484	Photo_RC_L/M	Pfam	29	318
IPR000484	Photo_RC_L/M	ProSitePatterns	191	217
IPR000484	Photo_RC_L/M	PRINTS	197	223
IPR000484	Photo_RC_L/M	PRINTS	142	164
IPR000484	Photo_RC_L/M	PRINTS	109	137

No CAZYmes available for this sequence

External Links

No external refs found!