Zm00001d001836_T001

Description : homocysteine methyltransferase 2

Gene families : OG_01_0072069 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0072069_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d001836_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d001836_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_38
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_161

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044030	regulation of DNA methylation	ISM	GOs from InterProScan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051052	regulation of DNA metabolic process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036589	HCY_dom_sf	Gene3D	199	295
IPR015270	RDM1_plant	PANTHER	138	183
IPR036319	RDM1_sf	SUPERFAMILY	138	182
IPR036319	RDM1_sf	Gene3D	133	198
IPR015270	RDM1_plant	Pfam	138	183
IPR036589	HCY_dom_sf	SUPERFAMILY	248	286
IPR036319	RDM1_sf	SUPERFAMILY	91	125
IPR036319	RDM1_sf	SUPERFAMILY	91	125
IPR036589	HCY_dom_sf	SUPERFAMILY	248	286
IPR015270	RDM1_plant	Pfam	138	183
IPR036589	HCY_dom_sf	Gene3D	199	295
IPR015270	RDM1_plant	PANTHER	1	210
IPR003726	HCY_dom	Pfam	247	284
IPR036319	RDM1_sf	SUPERFAMILY	138	182
IPR036319	RDM1_sf	Gene3D	133	198

No CAZYmes available for this sequence

External Links

No external refs found!