Zm00001d001882_T004

Description : signal recognition particle 19 kDa protein, putative / SRP19, putative

Gene families : OG_01_0002267 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002267_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d001882_T004
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d001882_T004
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_236
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_93

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006612	protein targeting to membrane	None	Extended
BP	GO:0006613	cotranslational protein targeting to membrane	None	Extended
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	ISM	GOs from InterProScan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008312	7S RNA binding	ISM	GOs from InterProScan
BP	GO:0009987	cellular process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0045047	protein targeting to ER	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
CC	GO:0048500	signal recognition particle	ISM	GOs from InterProScan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051668	localization within membrane	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0070972	protein localization to endoplasmic reticulum	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0090150	establishment of protein localization to membrane	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036521	SRP19-like_sf	Gene3D	14	129
IPR036521	SRP19-like_sf	SUPERFAMILY	19	121
IPR002778	Signal_recog_particle_SRP19	Pfam	25	119
IPR002778	Signal_recog_particle_SRP19	PANTHER	19	146
IPR036521	SRP19-like_sf	Gene3D	14	129
IPR002778	Signal_recog_particle_SRP19	PANTHER	15	145
IPR002778	Signal_recog_particle_SRP19	Pfam	25	119
IPR036521	SRP19-like_sf	SUPERFAMILY	19	121

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d001882_T004

Expression Profile

Co-expression Networks

Functional Annotation