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  5. Zm00001d002000_T003

Zm00001d002000_T003


Description : PLAT/LH2 domain-containing lipoxygenase family protein


Gene families : OG_01_0112114 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0112114_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d002000_T003
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d002000_T003
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_164
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_8


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
MF GO:0016491 oxidoreductase activity ISM GOs from InterProScan
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen ISM GOs from InterProScan
MF GO:0046872 metal ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000907 LipOase PANTHER 96 903
IPR001024 PLAT/LH2_dom SMART 76 201
IPR036392 PLAT/LH2_dom_sf SUPERFAMILY 96 203
IPR013819 LipOase_C PRINTS 536 553
IPR013819 LipOase_C PRINTS 574 594
IPR013819 LipOase_C PRINTS 554 571
IPR001024 PLAT/LH2_dom ProSiteProfiles 70 201
IPR036226 LipOase_C_sf SUPERFAMILY 207 904
IPR001246 LipOase_plant PRINTS 405 424
IPR001246 LipOase_plant PRINTS 271 290
IPR001246 LipOase_plant PRINTS 196 217
IPR001246 LipOase_plant PRINTS 171 189
IPR001246 LipOase_plant PRINTS 238 254
IPR013819 LipOase_C ProSiteProfiles 203 904
IPR013819 LipOase_C Pfam 370 887
IPR013819 LipOase_C Pfam 213 319
IPR020834 LipOase_CS ProSitePatterns 581 591
IPR000907 LipOase PANTHER 27 903
IPR001024 PLAT/LH2_dom ProSiteProfiles 70 201
IPR036392 PLAT/LH2_dom_sf SUPERFAMILY 96 203
IPR013819 LipOase_C ProSiteProfiles 203 904
IPR013819 LipOase_C PRINTS 536 553
IPR013819 LipOase_C PRINTS 574 594
IPR013819 LipOase_C PRINTS 554 571
IPR001024 PLAT/LH2_dom SMART 76 201
IPR020834 LipOase_CS ProSitePatterns 581 591
IPR013819 LipOase_C Pfam 213 319
IPR013819 LipOase_C Pfam 370 887
IPR001246 LipOase_plant PRINTS 405 424
IPR001246 LipOase_plant PRINTS 271 290
IPR001246 LipOase_plant PRINTS 196 217
IPR001246 LipOase_plant PRINTS 171 189
IPR001246 LipOase_plant PRINTS 238 254
IPR036226 LipOase_C_sf SUPERFAMILY 207 904

No CAZYmes available for this sequence

No external refs found!