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  5. Zm00001d002027_T002

Zm00001d002027_T002


Description : COP9-signalosome 5B


Gene families : OG_01_0003531 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003531_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d002027_T002
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d002027_T002
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_167
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_227


Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
CC GO:0008180 COP9 signalosome ISM GOs from InterProScan
MF GO:0070122 obsolete isopeptidase activity ISM GOs from InterProScan
MF GO:0140492 metal-dependent deubiquitinase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR037518 MPN ProSiteProfiles 60 197
IPR000555 JAMM/MPN+_dom SMART 59 196
IPR040961 CSN5_C Pfam 256 337
IPR000555 JAMM/MPN+_dom Pfam 57 168
IPR000555 JAMM/MPN+_dom Pfam 58 168
IPR040961 CSN5_C Pfam 256 337
IPR000555 JAMM/MPN+_dom SMART 59 196
IPR037518 MPN ProSiteProfiles 60 197

No CAZYmes available for this sequence

No external refs found!