Zm00001d002035_T001

Description : endonuclease 2

Gene families : OG_01_0007921 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007921_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d002035_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d002035_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_216
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_97

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004519	endonuclease activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006308	DNA catabolic process	ISM	GOs from InterProScan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	ISM	GOs from InterProScan
BP	GO:0019439	aromatic compound catabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034655	nucleobase-containing compound catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044270	cellular nitrogen compound catabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046700	heterocycle catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901361	organic cyclic compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR003154	S1/P1nuclease	CDD	24	279
IPR008947	PLipase_C/P1_nuclease_dom_sf	SUPERFAMILY	24	278
IPR003154	S1/P1nuclease	PANTHER	8	280
IPR008947	PLipase_C/P1_nuclease_dom_sf	Gene3D	24	284
IPR003154	S1/P1nuclease	Pfam	24	279
IPR008947	PLipase_C/P1_nuclease_dom_sf	Gene3D	24	284
IPR003154	S1/P1nuclease	Pfam	24	279
IPR003154	S1/P1nuclease	PANTHER	1	283
IPR008947	PLipase_C/P1_nuclease_dom_sf	SUPERFAMILY	24	278
IPR003154	S1/P1nuclease	CDD	24	279

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d002035_T001

Expression Profile

Co-expression Networks

Functional Annotation