Zm00001d002084_T007

Description : zinc finger (ubiquitin-hydrolase) domain-containing protein

Gene families : OG_01_0004836 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004836_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d002084_T007
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d002084_T007
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_146
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_251

Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	ISM	GOs from InterProScan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
BP	GO:0010029	regulation of seed germination	ISM	GOs from InterProScan
BP	GO:0016567	protein ubiquitination	ISM	GOs from InterProScan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016755	aminoacyltransferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:1900140	regulation of seedling development	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR013083	Znf_RING/FYVE/PHD	Gene3D	310	410
IPR001607	Znf_UBP	SMART	329	378
IPR001607	Znf_UBP	Pfam	330	391
IPR011422	BRAP2/ETP1_RRM	Pfam	117	213
IPR001607	Znf_UBP	ProSiteProfiles	312	407
IPR001607	Znf_UBP	ProSiteProfiles	328	389
IPR013083	Znf_RING/FYVE/PHD	Gene3D	310	410
IPR011422	BRAP2/ETP1_RRM	Pfam	117	213
IPR001607	Znf_UBP	Pfam	330	389
IPR001607	Znf_UBP	SMART	329	378

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d002084_T007

Expression Profile

Co-expression Networks

Functional Annotation