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Description : Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG_01_0001699 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001699_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d002089_T003 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d002089_T003 | |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_107 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_125 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| BP | GO:0006996 | organelle organization | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR019734 | TPR_repeat | SMART | 936 | 969 |
| IPR019734 | TPR_repeat | SMART | 978 | 1011 |
| IPR019734 | TPR_repeat | SMART | 1020 | 1053 |
| IPR025697 | CLU_dom | ProSiteProfiles | 311 | 600 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 936 | 969 |
| IPR028275 | CLU_N | Pfam | 48 | 118 |
| IPR027523 | CLU_prot | PANTHER | 17 | 1415 |
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 903 | 1007 |
| IPR033646 | CLU-central | Pfam | 722 | 865 |
| IPR033646 | CLU-central | CDD | 724 | 866 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 895 | 1172 |
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 973 | 1091 |
| IPR023231 | GSKIP_dom_sf | SUPERFAMILY | 214 | 271 |
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 973 | 1091 |
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 903 | 1007 |
| IPR027523 | CLU_prot | PANTHER | 1 | 1714 |
| IPR028275 | CLU_N | Pfam | 48 | 119 |
| IPR019734 | TPR_repeat | SMART | 936 | 969 |
| IPR019734 | TPR_repeat | SMART | 978 | 1011 |
| IPR019734 | TPR_repeat | SMART | 1020 | 1053 |
| IPR023231 | GSKIP_dom_sf | SUPERFAMILY | 214 | 271 |
| IPR033646 | CLU-central | CDD | 724 | 866 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 936 | 969 |
| IPR025697 | CLU_dom | ProSiteProfiles | 311 | 600 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 895 | 1172 |
| IPR033646 | CLU-central | Pfam | 722 | 865 |
No CAZYmes available for this sequence
| No external refs found! |