Zm00001d002190_T001

Description : ARM repeat superfamily protein

Gene families : OG_01_0004479 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004479_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d002190_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d002190_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_165
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_191

Type	GO Term	Name	Evidence	Source
BP	GO:0000054	ribosomal subunit export from nucleus	None	Extended
BP	GO:0000055	ribosomal large subunit export from nucleus	ISM	GOs from InterProScan
BP	GO:0006810	transport	None	Extended
BP	GO:0006913	nucleocytoplasmic transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0022613	ribonucleoprotein complex biogenesis	None	Extended
BP	GO:0031503	protein-containing complex localization	None	Extended
BP	GO:0033750	ribosome localization	None	Extended
BP	GO:0042273	ribosomal large subunit biogenesis	ISM	GOs from InterProScan
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051168	nuclear export	None	Extended
BP	GO:0051169	nuclear transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051640	organelle localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051656	establishment of organelle localization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR027312	Sda1	PANTHER	18	822
IPR048292	SDA1_C	Pfam	786	831
IPR016024	ARM-type_fold	SUPERFAMILY	86	485
IPR012977	SDA1_N	Pfam	88	462
IPR012977	SDA1_N	Pfam	88	139
IPR027312	Sda1	PANTHER	24	833
IPR016024	ARM-type_fold	SUPERFAMILY	86	485
IPR007949	SDA1_MD	Pfam	448	830

No CAZYmes available for this sequence

External Links

No external refs found!