Zm00001d002258_T001

Description : Glycine cleavage T-protein family

Gene families : OG_01_0011405 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011405_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d002258_T001	No neighbors in network
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d002258_T001
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_8

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004047	aminomethyltransferase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006544	glycine metabolic process	None	Extended
BP	GO:0006546	glycine catabolic process	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009063	amino acid catabolic process	None	Extended
BP	GO:0009069	serine family amino acid metabolic process	None	Extended
BP	GO:0009071	serine family amino acid catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016054	organic acid catabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044282	small molecule catabolic process	None	Extended
BP	GO:0046395	carboxylic acid catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901606	alpha-amino acid catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR006222	GCV_T_N	Pfam	42	297
IPR027266	TrmE/GcvT_dom1	Gene3D	38	274
IPR028896	GCST/YgfZ/DmdA	PANTHER	18	408
IPR006223	GCS_T	NCBIfam	37	402
IPR029043	GcvT/YgfZ_C	SUPERFAMILY	314	407
IPR013977	GCV_T_C	Pfam	325	401
IPR006223	GCS_T	TIGRFAM	37	402
IPR029043	GcvT/YgfZ_C	SUPERFAMILY	314	407
IPR027266	TrmE/GcvT_dom1	Gene3D	38	274
IPR028896	GCST/YgfZ/DmdA	PANTHER	30	408
IPR006222	GCV_T_N	Pfam	42	297
IPR013977	GCV_T_C	Pfam	325	401

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d002258_T001

Expression Profile

Co-expression Networks

Functional Annotation