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  5. Zm00001d002260_T003

Zm00001d002260_T003


Description : Aldolase-type TIM barrel family protein


Gene families : OG_01_0000206 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000206_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d002260_T003
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d002260_T003
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_278
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_49


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
MF GO:0010181 FMN binding ISM GOs from InterProScan
MF GO:0016491 oxidoreductase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR012133 Alpha-hydoxy_acid_DH_FMN CDD 45 461
IPR008259 FMN_hydac_DH_AS ProSitePatterns 332 338
IPR013785 Aldolase_TIM Gene3D 249 476
IPR037396 FMN_HAD ProSiteProfiles 36 469
IPR000262 FMN-dep_DH Pfam 379 464
IPR000262 FMN-dep_DH Pfam 270 359
IPR000262 FMN-dep_DH Pfam 51 143
IPR013785 Aldolase_TIM Gene3D 39 152
IPR008259 FMN_hydac_DH_AS ProSitePatterns 332 338
IPR013785 Aldolase_TIM Gene3D 39 152
IPR012133 Alpha-hydoxy_acid_DH_FMN CDD 45 461
IPR000262 FMN-dep_DH Pfam 273 464
IPR000262 FMN-dep_DH Pfam 51 143
IPR013785 Aldolase_TIM Gene3D 249 476
IPR037396 FMN_HAD ProSiteProfiles 36 469

No CAZYmes available for this sequence

No external refs found!