Zm00001d002296_T001

Description : HISTIDINE BIOSYNTHESIS 5B

Gene families : OG_01_0008676 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008676_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d002296_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d002296_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_4
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_20

Type	GO Term	Name	Evidence	Source
BP	GO:0000105	histidine biosynthetic process	ISM	GOs from InterProScan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004424	imidazoleglycerol-phosphate dehydratase activity	ISM	GOs from InterProScan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006547	histidine metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008652	amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016835	carbon-oxygen lyase activity	None	Extended
MF	GO:0016836	hydro-lyase activity	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000807	ImidazoleglycerolP_deHydtase	PANTHER	63	294
IPR000807	ImidazoleglycerolP_deHydtase	Hamap	70	307
IPR038494	IGPD_sf	Gene3D	60	163
IPR020568	Ribosomal_Su5_D2-typ_SF	SUPERFAMILY	70	160
IPR000807	ImidazoleglycerolP_deHydtase	CDD	72	307
IPR000807	ImidazoleglycerolP_deHydtase	Pfam	224	277
IPR000807	ImidazoleglycerolP_deHydtase	Pfam	99	216
IPR020565	ImidazoleglycerP_deHydtase_CS	ProSitePatterns	259	271
IPR038494	IGPD_sf	Gene3D	164	296
IPR020565	ImidazoleglycerP_deHydtase_CS	ProSitePatterns	135	148
IPR020568	Ribosomal_Su5_D2-typ_SF	SUPERFAMILY	162	281
IPR000807	ImidazoleglycerolP_deHydtase	PANTHER	231	310
IPR020568	Ribosomal_Su5_D2-typ_SF	SUPERFAMILY	70	160
IPR000807	ImidazoleglycerolP_deHydtase	PANTHER	49	209
IPR020565	ImidazoleglycerP_deHydtase_CS	ProSitePatterns	259	271
IPR020565	ImidazoleglycerP_deHydtase_CS	ProSitePatterns	135	148
IPR000807	ImidazoleglycerolP_deHydtase	Hamap	70	307
IPR000807	ImidazoleglycerolP_deHydtase	CDD	72	307
IPR000807	ImidazoleglycerolP_deHydtase	Pfam	99	215
IPR000807	ImidazoleglycerolP_deHydtase	Pfam	224	277
IPR020568	Ribosomal_Su5_D2-typ_SF	SUPERFAMILY	162	281
IPR038494	IGPD_sf	Gene3D	60	163
IPR038494	IGPD_sf	Gene3D	164	296

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d002296_T001

Expression Profile

Co-expression Networks

Functional Annotation