Zm00001d002388_T003

Description : alpha-mannosidase 1

Gene families : OG_01_0007663 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007663_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d002388_T003
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d002388_T003
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_296
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_83

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004559	alpha-mannosidase activity	None	Extended
MF	GO:0004571	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0015923	mannosidase activity	None	Extended
MF	GO:0015924	mannosyl-oligosaccharide mannosidase activity	None	Extended
CC	GO:0016020	membrane	ISM	GOs from InterProScan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036026	Seven-hairpin_glycosidases	SUPERFAMILY	96	541
IPR001382	Glyco_hydro_47	PRINTS	376	392
IPR001382	Glyco_hydro_47	PRINTS	143	157
IPR001382	Glyco_hydro_47	PRINTS	505	525
IPR001382	Glyco_hydro_47	PRINTS	110	130
IPR001382	Glyco_hydro_47	PRINTS	313	330
IPR001382	Glyco_hydro_47	PRINTS	180	198
IPR001382	Glyco_hydro_47	PRINTS	446	470
IPR001382	Glyco_hydro_47	PRINTS	219	238
IPR012341	6hp_glycosidase-like_sf	Gene3D	86	550
IPR001382	Glyco_hydro_47	Pfam	110	541
IPR012341	6hp_glycosidase-like_sf	Gene3D	86	550
IPR001382	Glyco_hydro_47	PRINTS	376	392
IPR001382	Glyco_hydro_47	PRINTS	143	157
IPR001382	Glyco_hydro_47	PRINTS	505	525
IPR001382	Glyco_hydro_47	PRINTS	110	130
IPR001382	Glyco_hydro_47	PRINTS	313	330
IPR001382	Glyco_hydro_47	PRINTS	180	198
IPR001382	Glyco_hydro_47	PRINTS	446	470
IPR001382	Glyco_hydro_47	PRINTS	219	238
IPR036026	Seven-hairpin_glycosidases	SUPERFAMILY	96	541
IPR001382	Glyco_hydro_47	Pfam	110	541

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
GH47	446	566	5.6e-160	110	541

External Links

No external refs found!