Zm00001d002441_T002

Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein

Gene families : OG_01_0000511 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000511_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d002441_T002
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d002441_T002
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_78
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_195

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR011990	TPR-like_helical_dom_sf	SUPERFAMILY	1697	1846
IPR014016	UvrD-like_ATP-bd	Pfam	1345	1433
IPR027417	P-loop_NTPase	Gene3D	1088	1458
IPR027417	P-loop_NTPase	SUPERFAMILY	281	847
IPR041677	DNA2/NAM7_AAA_11	Pfam	282	633
IPR027417	P-loop_NTPase	Gene3D	1479	1675
IPR027417	P-loop_NTPase	SUPERFAMILY	1090	1664
IPR039904	TRANK1	PANTHER	631	2800
IPR027417	P-loop_NTPase	Gene3D	227	662
IPR045529	DUF6469	Pfam	121	236
IPR027417	P-loop_NTPase	Gene3D	663	871
IPR047187	SF1_C_Upf1	CDD	665	854
IPR041679	DNA2/NAM7-like_C	Pfam	643	836
IPR014016	UvrD-like_ATP-bd	ProSiteProfiles	1090	1484
IPR027417	P-loop_NTPase	Gene3D	1088	1458
IPR027417	P-loop_NTPase	Gene3D	1479	1675
IPR027417	P-loop_NTPase	SUPERFAMILY	1090	1664
IPR011990	TPR-like_helical_dom_sf	SUPERFAMILY	1697	1846
IPR041677	DNA2/NAM7_AAA_11	Pfam	282	633
IPR041679	DNA2/NAM7-like_C	Pfam	643	836
IPR014016	UvrD-like_ATP-bd	Pfam	1344	1433
IPR027417	P-loop_NTPase	Gene3D	663	871
IPR014016	UvrD-like_ATP-bd	ProSiteProfiles	1090	1484
IPR039904	TRANK1	PANTHER	53	2800
IPR027417	P-loop_NTPase	Gene3D	227	662
IPR041679	DNA2/NAM7-like_C	CDD	665	854
IPR045529	DUF6469	Pfam	123	236
IPR027417	P-loop_NTPase	SUPERFAMILY	281	847

No CAZYmes available for this sequence

External Links

No external refs found!