Zm00001d002478_T001

Description : NDR1/HIN1-like 8

Gene families : OG_01_0008184 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008184_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d002478_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d002478_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_296
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_51

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	ISM	GOs from InterProScan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016755	aminoacyltransferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001841	Znf_RING	SMART	428	512
IPR001841	Znf_RING	SMART	593	622
IPR001841	Znf_RING	SMART	340	387
IPR044066	TRIAD_supradom	ProSiteProfiles	336	556
IPR006575	RWD_dom	ProSiteProfiles	145	282
IPR006575	RWD_dom	SMART	145	282
IPR002867	IBR_dom	SMART	408	466
IPR002867	IBR_dom	SMART	491	552
IPR013083	Znf_RING/FYVE/PHD	Gene3D	336	422
IPR016135	UBQ-conjugating_enzyme/RWD	Gene3D	131	283
IPR006575	RWD_dom	Pfam	141	277
IPR001841	Znf_RING	ProSiteProfiles	340	388
IPR017907	Znf_RING_CS	ProSitePatterns	357	366
IPR016135	UBQ-conjugating_enzyme/RWD	SUPERFAMILY	138	277
IPR031127	E3_UB_ligase_RBR	PANTHER	308	549
IPR002867	IBR_dom	Pfam	496	541
IPR002867	IBR_dom	Pfam	408	466
IPR031127	E3_UB_ligase_RBR	PANTHER	109	579
IPR002867	IBR_dom	Pfam	496	542
IPR002867	IBR_dom	Pfam	408	466
IPR002867	IBR_dom	SMART	408	466
IPR002867	IBR_dom	SMART	491	552
IPR006575	RWD_dom	SMART	145	282
IPR016135	UBQ-conjugating_enzyme/RWD	SUPERFAMILY	138	277
IPR016135	UBQ-conjugating_enzyme/RWD	Gene3D	131	283
IPR001841	Znf_RING	ProSiteProfiles	340	388
IPR006575	RWD_dom	ProSiteProfiles	145	282
IPR001841	Znf_RING	SMART	428	512
IPR001841	Znf_RING	SMART	593	622
IPR001841	Znf_RING	SMART	340	387
IPR013083	Znf_RING/FYVE/PHD	Gene3D	336	422
IPR006575	RWD_dom	Pfam	142	277
IPR017907	Znf_RING_CS	ProSitePatterns	357	366
IPR044066	TRIAD_supradom	ProSiteProfiles	336	556

No CAZYmes available for this sequence

External Links

No external refs found!