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  5. Zm00001d002504_T002

Zm00001d002504_T002


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0001826 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001826_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d002504_T002
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d002504_T002
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_257
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_132


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
CC GO:0048188 Set1C/COMPASS complex ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001680 WD40_rpt ProSiteProfiles 113 145
IPR037867 Swd2/WDR82 PANTHER 7 319
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 249 324
IPR001680 WD40_rpt ProSiteProfiles 254 284
IPR001680 WD40_rpt ProSiteProfiles 25 67
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 30 317
IPR020472 G-protein_beta_WD-40_rep PRINTS 262 276
IPR020472 G-protein_beta_WD-40_rep PRINTS 132 146
IPR020472 G-protein_beta_WD-40_rep PRINTS 45 59
IPR019775 WD40_repeat_CS ProSitePatterns 262 276
IPR001680 WD40_rpt SMART 18 58
IPR001680 WD40_rpt SMART 191 230
IPR001680 WD40_rpt SMART 106 145
IPR001680 WD40_rpt SMART 61 96
IPR001680 WD40_rpt SMART 233 275
IPR001680 WD40_rpt Pfam 109 145
IPR001680 WD40_rpt Pfam 30 58
IPR001680 WD40_rpt Pfam 254 275
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 11 248
IPR019775 WD40_repeat_CS ProSitePatterns 262 276
IPR020472 G-protein_beta_WD-40_rep PRINTS 262 276
IPR020472 G-protein_beta_WD-40_rep PRINTS 132 146
IPR020472 G-protein_beta_WD-40_rep PRINTS 45 59
IPR001680 WD40_rpt ProSiteProfiles 25 67
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 11 248
IPR037867 Swd2/WDR82 PANTHER 1 326
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 30 317
IPR001680 WD40_rpt SMART 18 58
IPR001680 WD40_rpt SMART 191 230
IPR001680 WD40_rpt SMART 106 145
IPR001680 WD40_rpt SMART 61 96
IPR001680 WD40_rpt SMART 233 275
IPR001680 WD40_rpt ProSiteProfiles 113 145
IPR001680 WD40_rpt Pfam 232 275
IPR001680 WD40_rpt Pfam 110 145
IPR001680 WD40_rpt ProSiteProfiles 254 284
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 249 324

No CAZYmes available for this sequence

No external refs found!