Zm00001d002553_T001

Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein

Gene families : OG_01_0001318 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001318_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d002553_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d002553_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_205
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_235

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	ISM	GOs from InterProScan
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR045529	DUF6469	Pfam	133	232
IPR045055	DNA2/NAM7-like	PANTHER	24	1166
IPR027417	P-loop_NTPase	Gene3D	219	683
IPR047187	SF1_C_Upf1	CDD	686	877
IPR027417	P-loop_NTPase	Gene3D	684	895
IPR027417	P-loop_NTPase	SUPERFAMILY	286	923
IPR041677	DNA2/NAM7_AAA_11	Pfam	606	655
IPR041677	DNA2/NAM7_AAA_11	Pfam	288	386
IPR041679	DNA2/NAM7-like_C	Pfam	663	858
IPR027417	P-loop_NTPase	Gene3D	219	683
IPR027417	P-loop_NTPase	Gene3D	684	895
IPR041677	DNA2/NAM7_AAA_11	Pfam	606	655
IPR041677	DNA2/NAM7_AAA_11	Pfam	288	383
IPR045529	DUF6469	Pfam	133	232
IPR045055	DNA2/NAM7-like	PANTHER	36	911
IPR045055	DNA2/NAM7-like	PANTHER	1178	1215
IPR041679	DNA2/NAM7-like_C	Pfam	663	859
IPR027417	P-loop_NTPase	SUPERFAMILY	286	923
IPR041679	DNA2/NAM7-like_C	CDD	686	877

No CAZYmes available for this sequence

External Links

No external refs found!