Zm00001d002562_T001

Description : AP2/B3-like transcriptional factor family protein

Gene families : OG_01_0012975 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012975_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d002562_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d002562_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_65
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_75

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0003700	DNA-binding transcription factor activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR003340	B3_DNA-bd	CDD	92	179
IPR003340	B3_DNA-bd	ProSiteProfiles	94	199
IPR044800	LEC2-like	PANTHER	13	342
IPR003340	B3_DNA-bd	Pfam	94	181
IPR015300	DNA-bd_pseudobarrel_sf	SUPERFAMILY	91	185
IPR015300	DNA-bd_pseudobarrel_sf	Gene3D	87	207
IPR003340	B3_DNA-bd	SMART	94	199
IPR003340	B3_DNA-bd	SMART	94	199
IPR015300	DNA-bd_pseudobarrel_sf	SUPERFAMILY	91	185
IPR003340	B3_DNA-bd	ProSiteProfiles	94	199
IPR003340	B3_DNA-bd	Pfam	94	198
IPR003340	B3_DNA-bd	CDD	92	179
IPR015300	DNA-bd_pseudobarrel_sf	Gene3D	87	207
IPR044800	LEC2-like	PANTHER	1	407

No CAZYmes available for this sequence

External Links

No external refs found!