Zm00001d002580_T004

Description : Mechanosensitive ion channel protein

Gene families : OG_01_0003758 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003758_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d002580_T004
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d002580_T004
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_296
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_7

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	ISM	GOs from InterProScan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	ISM	GOs from InterProScan
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR023408	MscS_beta-dom_sf	Gene3D	446	494
IPR011014	MscS_channel_TM-2	SUPERFAMILY	342	429
IPR006685	MscS_channel_2nd	Pfam	430	497
IPR010920	LSM_dom_sf	SUPERFAMILY	430	496
IPR006685	MscS_channel_2nd	Pfam	388	590
IPR010920	LSM_dom_sf	SUPERFAMILY	430	496
IPR011014	MscS_channel_TM-2	SUPERFAMILY	342	429
IPR023408	MscS_beta-dom_sf	Gene3D	446	494

No CAZYmes available for this sequence

External Links

No external refs found!