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  5. Zm00001d002682_T001

Zm00001d002682_T001


Description : alpha-L-fucosidase 1


Gene families : OG_01_0010780 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010780_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d002682_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d002682_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_162
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_205


Type GO Term Name Evidence Source
MF GO:0004560 alpha-L-fucosidase activity ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000933 Glyco_hydro_29 SMART 31 507
IPR000933 Glyco_hydro_29 Pfam 314 471
IPR000933 Glyco_hydro_29 Pfam 72 181
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 308 474
IPR000933 Glyco_hydro_29 PANTHER 308 615
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 29 183
IPR008979 Galactose-bd-like_sf SUPERFAMILY 480 600
IPR008979 Galactose-bd-like_sf SUPERFAMILY 480 600
IPR000933 Glyco_hydro_29 Pfam 72 181
IPR000933 Glyco_hydro_29 Pfam 308 471
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 29 183
IPR000933 Glyco_hydro_29 SMART 31 507
IPR000933 Glyco_hydro_29 PANTHER 6 639
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 308 474
HMM Family HMM Length Query Length e-Value Query Start Query End
GH29 346 651 1.4e-43 40 181
No external refs found!